To judge the show in this context would be to blame Anno for his understanding of battle and military command for why all the mistakes NERV command made, and to use that as a basis of criticism of the show (while I would argue that the show would be better and compelling if he did understand, not to say that it is not). What I am judging is how NERV command dealt with the issue of its broken pilots, and just how poor its battle strategies were in context to its universe.
Neon Genesis Evangelion isn't a bad show because it fails to help its main characters; rather, NERV is a bad organization because it fails to help its pilots.
I'm not ignoring NGE's premise of it being about how NERV Command. . .
were making due with what they had. What they had was not optimal, but it was the best they could manage at the time.
I am criticizing the fact that NERV Command did not make use of what best they had. They had trained military generals at their disposal (JSSDF), they had to have had psychiatrists at their disposal, and they didn't use them. In fact, they squandered their best pilot. SQUANDERED.
Let me rephrase it better: Asuka was a bait.
She get on the front to draw the Angel attention (because she's expandable and because her EVA-02 is sturdier than EVA-00 due to being a Production Model), so Rei has the time to install and charge the Positron Rifle. The big flaw in their plan was that they didn't expected Areal to have a range that insanely high, and the precision that goes with it.
Why the hell would you use Asuka, who, as I keep on saying,
is their best pilot, as bait? After seeing what damage prior Angels can do to Evangelions, and considering how expensive and precious Evangelions are,
who in their right mind would think using one as bait would be a good strategy? And suppose it is a good strategy:
Why not use Rei, who has been demonstrated to be easily replaced (her memory gets wiped, so it is fair to assume that her mental status after being reworked would probably be okay, if you consider Rei's normal situation okay)? The only reason her cover of being a clone was blown was because Ritsuko just showed it to Misato and Shinji.
Gendo don't give a shit, because militarily he is incompetent (that's why Misato is here).
This is what I am trying to say. Except I would argue that, at some points, Misato is also incompetent.